Low-cost capacitive CMOS capacitive E. Coli biosensor for point-of-need water quality monitoring

dc.contributor.advisorJoubert, Trudi-Heleen
dc.contributor.emailgeorge.andrews@tuks.co.zaen_US
dc.contributor.postgraduateAndrews, George
dc.date.accessioned2023-12-19T12:28:35Z
dc.date.available2023-12-19T12:28:35Z
dc.date.created2024-04
dc.date.issued2023
dc.descriptionDissertation (MEng (Microelectronic Engineering))--University of Pretoria, 2023.en_US
dc.description.abstractExposure to pathogenic Escherichia coli (E. coli) bacteria through contaminated water can cause potentially life-threatening diarrhea and vomiting, and it is a useful water quality indicator. Simulations and experiments are conducted to give guidelines on low-cost capacitive biosensing devices aimed at bacterial sensing, and a custom integrated circuit that can be used in a low-cost capacitive biosensing device is delivered. Finite element modelling was conducted to compare the electric fields (E-fields) and capacitance across different electrode geometries and materials. The size of electrode features had the biggest impact on electric field strength and relative capacitance change in the presence of cell-like structures. The simulation results are used to clarify assumptions on how simulations for the design of capacitive sensing electrodes need to be conducted. Capacitance measurement of low-cost and commercial electrodes was conducted using a benchtop LCR meter and 3 μm microbeads as substitutes for E. coli cells. It was found that the measured capacitance increases as the concentration of microbeads increases, and the low-cost electrodes seem to show a higher-than-expected sensitivity when compared to commercial electrodes with smaller feature sizes. Electric impedance spectroscopy experiments conducted on E. coli cells showed a similar performance as characterisation experiments using microbeads. These insights inform the development of guidelines that may be used to design low-cost electrodes for similar applications. A custom integrated circuit (IC) featuring a capacitive sensing array with sub-surface electrodes was designed and delivered. This IC also includes the custom operational amplifier used in the sensing array, used in a low-cost capacitive biosensor prototype for point-of-need use. The low-cost device was characterised with 3 μm microbeads using a subset of the electrodes used in the LCR experiments, with comparable results achieved using the low-cost device. Lessons learned in the design of the low-cost system guide the development of a design flow for the design of point-of-need water quality monitoring devices and gives guidance on the required hardware to build such devices.en_US
dc.description.availabilityUnrestricteden_US
dc.description.degreeMEng (Microelectronic Engineering)en_US
dc.description.departmentElectrical, Electronic and Computer Engineeringen_US
dc.description.facultyFaculty of Engineering, Built Environment and Information Technologyen_US
dc.description.sponsorshipNRF Grant IRG105878en_US
dc.identifier.citation*en_US
dc.identifier.otherA2024en_US
dc.identifier.urihttp://hdl.handle.net/2263/93825
dc.language.isoenen_US
dc.publisherUniversity of Pretoria
dc.rights© 2023 University of Pretoria. All rights reserved. The copyright in this work vests in the University of Pretoria. No part of this work may be reproduced or transmitted in any form or by any means, without the prior written permission of the University of Pretoria.
dc.subjectUCTDen_US
dc.subjectCapacitive biosensingen_US
dc.subjectLab-on-chipen_US
dc.subjectWater quality monitoringen_US
dc.subjectCMOSen_US
dc.subjectE. Colien_US
dc.subject.otherSustainable Development Goals (SDGs)
dc.subject.otherEngineering, built environment and information technology theses SDG-06
dc.subject.otherSDG-06: Clean water and sanitation
dc.titleLow-cost capacitive CMOS capacitive E. Coli biosensor for point-of-need water quality monitoringen_US
dc.typeDissertationen_US

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