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Phylogeny and historical biogeography of the southern African lacewing genus Afroptera (Neuroptera: Nemopteridae: Nemopterinae)
The lacewing genus Afroptera Abdalla & Mansell (Neuroptera: Nemopteridae: Nemopterinae) is endemic to southern Africa, predominantly found in the Fynbos and Succulent Karoo biomes. The taxonomy of the genus has been recently resolved. However, the monophyly and evolutionary history of the genus has never been addressed. This study employs an integrative phylogenetic approach, by incorporating three ribosomal genes (16S, 28S and 18S) and two protein-coding genes (cytochrome oxidase subunit I and carbamoyl-phosphate synthetase-aspartate transcarbamoylase-dihydroorotase), and morphological data to examine the monophyly and historical biogeography of Afroptera. We use Bayesian, parsimony and maximum likelihood phylogenetic methods to assess the monophyly and relatedness of Afroptera within the Nemopterinae. We also use ancestral range reconstruction and diversification analysis to infer the historical biogeography of the genus. Our analyses reveal the genus as a monophyletic lineage. The genus Afroptera originated during the Pliocene (5.24–3.13 Mya) in a desert environment, experiencing rapid speciation during the Pleistocene, primarily within the Fynbos and Succulent biomes; and secondarily dispersed into the Nama Karoo and Savannah (Kalahari) biomes. The current distribution patterns of Afroptera species likely stem from intensified aridification in the southwest during the Plio-Pleistocene, consistent with the dry-adapted nature of Afroptera's ancestors. Therefore, our findings suggest a climatically driven diversification model for the genus Afroptera.
Description:
DATA AVAILABILITY STATEMENT :
All molecular sequence data is available on GenBank. All molecular sequence data is available on GenBank. Datasets, R scripts and trees are available on Dryad (https://doi.org/10.5061/dryad.tmpg4f56k).
SUPPLEMENTARY MATERIAL : APPENDIX S1. Morphological characters list and their corresponding states used in this study. FIGURE S1. Fifty percent majority rule consensus tree resulting from Bayesian analysis of the combined (COI, CAD, 16S, 28S and 18S) with PP, MP and MLB given, respectively. Dashes (-) on nodes indicate weak/no support. Letters below branches indicate the clade's name.
FIGURE S2. The single most parsimonious tree of the combined morphological/molecular concatenated dataset with bootstrap support values on each branch. Dashes (-) on branches indicate weak/no support. TABLE S1. Species included in this study, with collection locality and GenBank accession numbers.
TABLE S2. Primers used for PCR amplification.
TABLE S3. Estimated model parameters for COI, 16S, 28S 18S and CAD for Afroptera using JMODELTEST.